Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 TSPY12P-201ENST00000421279 868 ntBASIC17.41■□□□□ 0.38
PRICKLE3O43900 AC068472.1-201ENST00000474589 881 ntBASIC17.41■□□□□ 0.38
PRICKLE3O43900 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 AL353801.3-201ENST00000609898 542 ntBASIC17.41■□□□□ 0.38
PRICKLE3O43900 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PRICKLE3O43900 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRICKLE3O43900 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 AL354751.1-201ENST00000412768 1863 ntBASIC17.4■□□□□ 0.38
PRICKLE3O43900 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 AL845331.1-201ENST00000424978 1190 ntBASIC17.4■□□□□ 0.38
PRICKLE3O43900 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 GUSBP12-201ENST00000513727 720 ntBASIC17.4■□□□□ 0.38
PRICKLE3O43900 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRICKLE3O43900 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.4■□□□□ 0.38
PRICKLE3O43900 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRICKLE3O43900 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRICKLE3O43900 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRICKLE3O43900 ABALON-201ENST00000629058 1903 ntBASIC17.39■□□□□ 0.37
PRICKLE3O43900 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 AL592071.1-201ENST00000611956 408 ntBASIC17.39■□□□□ 0.37
PRICKLE3O43900 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRICKLE3O43900 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.39■□□□□ 0.37
PRICKLE3O43900 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 DRAXINP1-201ENST00000437611 948 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms