Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.39■□□□□ 0.85
ACTN4O43707 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.38■□□□□ 0.85
ACTN4O43707 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
ACTN4O43707 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.38■□□□□ 0.85
ACTN4O43707 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.38■□□□□ 0.85
ACTN4O43707 LINC01568-207ENST00000641790 1380 ntBASIC20.38■□□□□ 0.85
ACTN4O43707 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.38■□□□□ 0.85
ACTN4O43707 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.38■□□□□ 0.85
ACTN4O43707 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.38■□□□□ 0.85
ACTN4O43707 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.38■□□□□ 0.85
ACTN4O43707 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.38■□□□□ 0.85
ACTN4O43707 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ACTN4O43707 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.38■□□□□ 0.85
ACTN4O43707 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ACTN4O43707 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACTN4O43707 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.38■□□□□ 0.85
ACTN4O43707 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ACTN4O43707 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ACTN4O43707 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ACTN4O43707 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.37■□□□□ 0.85
ACTN4O43707 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.37■□□□□ 0.85
ACTN4O43707 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.37■□□□□ 0.85
ACTN4O43707 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ACTN4O43707 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACTN4O43707 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ACTN4O43707 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ACTN4O43707 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
ACTN4O43707 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 AL512604.3-201ENST00000569583 964 ntBASIC20.36■□□□□ 0.85
ACTN4O43707 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.36■□□□□ 0.85
ACTN4O43707 AL157888.1-201ENST00000631930 593 ntBASIC20.36■□□□□ 0.85
ACTN4O43707 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.36■□□□□ 0.85
ACTN4O43707 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACTN4O43707 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
ACTN4O43707 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ACTN4O43707 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 DUTP2-201ENST00000519164 463 ntBASIC20.35■□□□□ 0.85
ACTN4O43707 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.35■□□□□ 0.85
ACTN4O43707 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 AL138966.2-201ENST00000621997 464 ntBASIC20.35■□□□□ 0.85
ACTN4O43707 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ACTN4O43707 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ACTN4O43707 AC066615.1-201ENST00000640911 628 ntBASIC20.35■□□□□ 0.85
ACTN4O43707 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
ACTN4O43707 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ACTN4O43707 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 LINC00167-201ENST00000530583 1419 ntBASIC20.35■□□□□ 0.85
ACTN4O43707 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.35■□□□□ 0.85
ACTN4O43707 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACTN4O43707 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms