Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXS1O43638 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 IGHV3-47-201ENST00000425060 335 ntBASIC17.05■□□□□ 0.32
FOXS1O43638 DUSP5P1-201ENST00000441325 1139 ntBASIC17.05■□□□□ 0.32
FOXS1O43638 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 KRT17P6-201ENST00000453795 1220 ntBASIC17.05■□□□□ 0.32
FOXS1O43638 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXS1O43638 AC012615.1-201ENST00000565797 1299 ntBASIC17.05■□□□□ 0.32
FOXS1O43638 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
FOXS1O43638 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXS1O43638 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXS1O43638 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXS1O43638 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXS1O43638 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FOXS1O43638 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXS1O43638 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXS1O43638 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 DUTP2-201ENST00000519164 463 ntBASIC17.04■□□□□ 0.32
FOXS1O43638 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXS1O43638 Z69720.1-201ENST00000601483 472 ntBASIC17.04■□□□□ 0.32
FOXS1O43638 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXS1O43638 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXS1O43638 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FOXS1O43638 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
FOXS1O43638 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FOXS1O43638 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXS1O43638 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXS1O43638 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXS1O43638 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 BICD1-207ENST00000551848 1962 ntBASIC17.03■□□□□ 0.32
FOXS1O43638 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FOXS1O43638 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXS1O43638 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FOXS1O43638 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FOXS1O43638 NUS1P1-201ENST00000446295 882 ntBASIC17.03■□□□□ 0.32
FOXS1O43638 AC104819.1-201ENST00000504587 486 ntBASIC17.03■□□□□ 0.32
FOXS1O43638 AC112698.1-201ENST00000510299 916 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms