Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
CHMP2AO43633 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC135776.1-201ENST00000319817 2481 ntBASIC20.4■□□□□ 0.86
CHMP2AO43633 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHMP2AO43633 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHMP2AO43633 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHMP2AO43633 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP2AO43633 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMP2AO43633 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC113404.2-201ENST00000507884 177 ntBASIC20.4■□□□□ 0.86
CHMP2AO43633 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC092329.2-201ENST00000598402 547 ntBASIC20.4■□□□□ 0.86
CHMP2AO43633 AL592071.1-201ENST00000611956 408 ntBASIC20.4■□□□□ 0.86
CHMP2AO43633 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 AC124864.1-201ENST00000623408 392 ntBASIC20.4■□□□□ 0.86
CHMP2AO43633 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2AO43633 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CHMP2AO43633 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CHMP2AO43633 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CHMP2AO43633 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CHMP2AO43633 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2AO43633 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMP2AO43633 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CHMP2AO43633 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMP2AO43633 LINC00265-3P-201ENST00000447588 903 ntBASIC20.39■□□□□ 0.85
CHMP2AO43633 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHMP2AO43633 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 AC090616.6-201ENST00000582640 721 ntBASIC20.39■□□□□ 0.85
CHMP2AO43633 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CHMP2AO43633 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2AO43633 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2AO43633 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP2AO43633 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHMP2AO43633 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP2AO43633 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.38■□□□□ 0.85
CHMP2AO43633 TSPY12P-201ENST00000421279 868 ntBASIC20.38■□□□□ 0.85
CHMP2AO43633 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMP2AO43633 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP2AO43633 GUSBP12-201ENST00000513727 720 ntBASIC20.38■□□□□ 0.85
CHMP2AO43633 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.38■□□□□ 0.85
CHMP2AO43633 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.38■□□□□ 0.85
CHMP2AO43633 HTR7P1-202ENST00000624664 4411 ntBASIC20.38■□□□□ 0.85
CHMP2AO43633 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMP2AO43633 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP2AO43633 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP2AO43633 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP2AO43633 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2AO43633 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2AO43633 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 LINC00167-201ENST00000530583 1419 ntBASIC20.37■□□□□ 0.85
CHMP2AO43633 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms