Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF3O43395 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 AC011498.5-201ENST00000592027 486 ntBASIC20.89■□□□□ 0.93
PRPF3O43395 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF3O43395 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPF3O43395 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRPF3O43395 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF3O43395 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF3O43395 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPF3O43395 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPF3O43395 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRPF3O43395 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PRPF3O43395 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PRPF3O43395 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 AC009154.2-201ENST00000621177 724 ntBASIC20.88■□□□□ 0.93
PRPF3O43395 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRPF3O43395 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF3O43395 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.88■□□□□ 0.93
PRPF3O43395 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.88■□□□□ 0.93
PRPF3O43395 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRPF3O43395 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PRPF3O43395 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRPF3O43395 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPF3O43395 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 ARMC10P1-201ENST00000313754 855 ntBASIC20.87■□□□□ 0.93
PRPF3O43395 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.87■□□□□ 0.93
PRPF3O43395 PCED1CP-201ENST00000419887 785 ntBASIC20.87■□□□□ 0.93
PRPF3O43395 TSPY12P-201ENST00000421279 868 ntBASIC20.87■□□□□ 0.93
PRPF3O43395 TSPY22P-201ENST00000427496 604 ntBASIC20.87■□□□□ 0.93
PRPF3O43395 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPF3O43395 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRPF3O43395 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.87■□□□□ 0.93
PRPF3O43395 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF3O43395 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 SLC25A6P5-201ENST00000435663 894 ntBASIC20.86■□□□□ 0.93
PRPF3O43395 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.86■□□□□ 0.93
PRPF3O43395 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF3O43395 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms