Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 HNRNPDP1-201ENST00000439535 754 ntBASIC19.38■□□□□ 0.69
HOXA2O43364 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA2O43364 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.38■□□□□ 0.69
HOXA2O43364 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 AL049840.3-201ENST00000602669 611 ntBASIC19.38■□□□□ 0.69
HOXA2O43364 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 AC097374.2-201ENST00000618617 1306 ntBASIC19.38■□□□□ 0.69
HOXA2O43364 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA2O43364 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXA2O43364 AC116562.4-201ENST00000641316 2276 ntBASIC19.37■□□□□ 0.69
HOXA2O43364 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
HOXA2O43364 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXA2O43364 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXA2O43364 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXA2O43364 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 SART3-203ENST00000546611 1184 ntBASIC19.37■□□□□ 0.69
HOXA2O43364 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXA2O43364 AC116407.3-201ENST00000623905 1129 ntBASIC19.37■□□□□ 0.69
HOXA2O43364 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXA2O43364 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXA2O43364 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXA2O43364 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA2O43364 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HOXA2O43364 HLA-J-201ENST00000462773 1622 ntBASIC19.36■□□□□ 0.69
HOXA2O43364 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.36■□□□□ 0.69
HOXA2O43364 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 PMS2P7-201ENST00000506558 1336 ntBASIC19.36■□□□□ 0.69
HOXA2O43364 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HOXA2O43364 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXA2O43364 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXA2O43364 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXA2O43364 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXA2O43364 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA2O43364 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HOXA2O43364 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXA2O43364 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 AC073130.3-201ENST00000624389 2278 ntBASIC19.35■□□□□ 0.69
HOXA2O43364 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA2O43364 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HOXA2O43364 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 OR7E14P-202ENST00000530490 1290 ntBASIC19.35■□□□□ 0.69
HOXA2O43364 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA2O43364 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 TERC-201ENST00000602385 541 ntBASIC19.35■□□□□ 0.69
HOXA2O43364 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA2O43364 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA2O43364 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA2O43364 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXA2O43364 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA2O43364 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXA2O43364 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXA2O43364 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms