Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTIFO43310 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTIFO43310 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CTIFO43310 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.24■□□□□ 0.67
CTIFO43310 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
CTIFO43310 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTIFO43310 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTIFO43310 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.23■□□□□ 0.67
CTIFO43310 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.23■□□□□ 0.67
CTIFO43310 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.23■□□□□ 0.67
CTIFO43310 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 AC093010.1-201ENST00000473625 1624 ntBASIC19.23■□□□□ 0.67
CTIFO43310 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTIFO43310 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTIFO43310 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.23■□□□□ 0.67
CTIFO43310 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 NTF6G-201ENST00000591094 616 ntBASIC19.23■□□□□ 0.67
CTIFO43310 AC069236.1-201ENST00000604339 616 ntBASIC19.23■□□□□ 0.67
CTIFO43310 AC092437.1-201ENST00000624794 1048 ntBASIC19.23■□□□□ 0.67
CTIFO43310 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTIFO43310 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTIFO43310 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.22■□□□□ 0.67
CTIFO43310 CNN2P6-201ENST00000439038 900 ntBASIC19.22■□□□□ 0.67
CTIFO43310 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.22■□□□□ 0.67
CTIFO43310 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 AL137784.2-201ENST00000607332 1000 ntBASIC19.22■□□□□ 0.67
CTIFO43310 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTIFO43310 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.22■□□□□ 0.67
CTIFO43310 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTIFO43310 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.22■□□□□ 0.67
CTIFO43310 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.21■□□□□ 0.67
CTIFO43310 BCL2-203ENST00000589955 5011 ntBASIC19.21■□□□□ 0.67
CTIFO43310 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.21■□□□□ 0.67
CTIFO43310 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTIFO43310 KRT8P3-201ENST00000519669 1449 ntBASIC19.21■□□□□ 0.67
CTIFO43310 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.21■□□□□ 0.67
CTIFO43310 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 LINC00304-203ENST00000565008 1864 ntBASIC19.21■□□□□ 0.67
CTIFO43310 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.21■□□□□ 0.67
CTIFO43310 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTIFO43310 AC008694.1-202ENST00000636953 945 ntBASIC19.21■□□□□ 0.67
CTIFO43310 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CTIFO43310 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 CYP2T1P-202ENST00000641596 2535 ntBASIC19.21■□□□□ 0.67
CTIFO43310 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTIFO43310 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTIFO43310 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CTIFO43310 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.2■□□□□ 0.66
CTIFO43310 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms