Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 TSPY19P-201ENST00000418461 509 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 TSPY18P-201ENST00000441642 509 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 LINC00265-3P-201ENST00000447588 903 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 FDX1P1-201ENST00000449115 551 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 AP003733.1-201ENST00000491725 852 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 AP000867.3-201ENST00000524675 377 ntBASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMX2-CTNND1H3BSU7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 KRT8P10-201ENST00000450021 1447 ntBASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC034236.2-201ENST00000606662 1610 ntBASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 TPSP2-201ENST00000561760 610 ntBASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC006333.2-201ENST00000607957 2099 ntBASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TMX2-CTNND1H3BSU7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms