Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC005332.3-201ENST00000589904 676 ntBASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AL390719.2-201ENST00000606993 987 ntBASIC12.95□□□□□ -0.34
LYRM9A8MSI8 AC116407.4-201ENST00000623319 1061 ntBASIC12.95□□□□□ -0.34
LYRM9A8MSI8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.95□□□□□ -0.34
LYRM9A8MSI8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AL353692.3-201ENST00000407031 1396 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AC022898.2-201ENST00000616822 1312 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AC093677.2-201ENST00000600169 1863 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TSPY12P-201ENST00000421279 868 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TSPY22P-201ENST00000427496 604 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 BX276092.5-203ENST00000456199 560 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 KRT8P26-201ENST00000534154 1276 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AL121672.3-201ENST00000608644 468 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 AC093010.1-201ENST00000473625 1624 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 Z83836.1-201ENST00000624605 1642 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYRM9A8MSI8 PHGDH-209ENST00000641074 1780 ntBASIC12.94□□□□□ -0.34
LYRM9A8MSI8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 AC099343.3-201ENST00000605834 2503 ntBASIC12.93□□□□□ -0.34
LYRM9A8MSI8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYRM9A8MSI8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms