Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 PHGDH-209ENST00000641074 1780 ntBASIC15.9■□□□□ 0.14
MBD3L5A6NJ08 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
MBD3L5A6NJ08 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ABCD1P5-201ENST00000445663 754 ntBASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 AC079776.4-201ENST00000511039 504 ntBASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 AP001005.1-201ENST00000571755 1248 ntBASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MBD3L5A6NJ08 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 AP005117.1-201ENST00000584346 1413 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 AL022342.1-201ENST00000400363 863 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 SCARNA2-201ENST00000458748 420 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 RNA5SP419-201ENST00000515908 135 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 DUTP2-201ENST00000519164 463 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 MTDHP3-201ENST00000594186 672 ntBASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MBD3L5A6NJ08 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MBD3L5A6NJ08 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms