Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AC009102.3-201ENST00000623118 1491 ntBASIC15.84■□□□□ 0.13
SHISA3A0PJX4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AL163051.1-201ENST00000569214 1512 ntBASIC15.84■□□□□ 0.13
SHISA3A0PJX4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 GPAT2P1-201ENST00000444924 1672 ntBASIC15.84■□□□□ 0.13
SHISA3A0PJX4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AC004951.3-201ENST00000418645 1148 ntBASIC15.84■□□□□ 0.13
SHISA3A0PJX4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AC233263.1-201ENST00000578059 224 ntBASIC15.84■□□□□ 0.13
SHISA3A0PJX4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHISA3A0PJX4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SHISA3A0PJX4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHISA3A0PJX4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHISA3A0PJX4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHISA3A0PJX4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SHISA3A0PJX4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ID1-201ENST00000376105 1233 ntBASIC15.83■□□□□ 0.12
SHISA3A0PJX4 NIFKP9-201ENST00000419265 221 ntBASIC15.83■□□□□ 0.12
SHISA3A0PJX4 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.83■□□□□ 0.12
SHISA3A0PJX4 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.83■□□□□ 0.12
SHISA3A0PJX4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 KRT16P5-201ENST00000455284 522 ntBASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms