Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 IGHGP-201ENST00000390555 1178 ntBASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 KRT18P48-201ENST00000434763 852 ntBASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 KRT18P65-201ENST00000439811 1286 ntBASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 DUX4L26-201ENST00000489078 1255 ntBASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 AC022616.7-201ENST00000525383 220 ntBASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV5S1A1TA0A578 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV5S1A1TA0A578 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms