Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 BCRP1-201ENST00000444246 691 ntBASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 AC027612.4-201ENST00000605371 583 ntBASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 AC093028.1-201ENST00000622998 982 ntBASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 FP475955.4-201ENST00000623131 1990 ntBASIC20.45■□□□□ 0.86
PTCH2Q9Y6C5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 AC006557.2-201ENST00000592985 1240 ntBASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 AL022326.1-202ENST00000641533 845 ntBASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCH2Q9Y6C5 AC009102.3-201ENST00000623118 1491 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 AC073130.3-201ENST00000624389 2278 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 ELL2P1-201ENST00000413990 1906 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 CEND1P1-201ENST00000451006 455 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 AC136632.2-201ENST00000512891 861 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 AC018845.2-201ENST00000568326 409 ntBASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCH2Q9Y6C5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 HEIH-201ENST00000623091 1652 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 PAWRP1-201ENST00000451083 565 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 AL096865.1-201ENST00000606796 927 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 AL513190.1-201ENST00000621254 727 ntBASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTCH2Q9Y6C5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms