Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LTB4R2-202ENST00000528054 3092 ntBASIC20.77■□□□□ 0.92
CLIC4Q9Y696 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.77■□□□□ 0.91
CLIC4Q9Y696 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.77■□□□□ 0.91
CLIC4Q9Y696 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIC4Q9Y696 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIC4Q9Y696 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLIC4Q9Y696 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLIC4Q9Y696 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 ECEL1P3-201ENST00000427961 737 ntBASIC20.75■□□□□ 0.91
CLIC4Q9Y696 MIR3917-201ENST00000580971 93 ntBASIC20.75■□□□□ 0.91
CLIC4Q9Y696 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIC4Q9Y696 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 NEK4P2-201ENST00000580004 1012 ntBASIC20.74■□□□□ 0.91
CLIC4Q9Y696 AL157888.1-201ENST00000631930 593 ntBASIC20.74■□□□□ 0.91
CLIC4Q9Y696 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms