Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 AL596275.1-201ENST00000423464 877 ntBASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 NAPSB-206ENST00000562112 1266 ntBASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 AC112497.1-201ENST00000624824 639 ntBASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RNF11Q9Y3C5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 SIRPAP1-201ENST00000448467 1770 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 ECEL1P2-202ENST00000465689 757 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AC128688.1-201ENST00000487626 519 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AC093827.2-201ENST00000512654 315 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF11Q9Y3C5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms