Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.19■□□□□ 0.82
GNEQ9Y223 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GNEQ9Y223 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GNEQ9Y223 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.19■□□□□ 0.82
GNEQ9Y223 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GNEQ9Y223 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
GNEQ9Y223 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GNEQ9Y223 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
GNEQ9Y223 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.18■□□□□ 0.82
GNEQ9Y223 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.18■□□□□ 0.82
GNEQ9Y223 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.18■□□□□ 0.82
GNEQ9Y223 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.18■□□□□ 0.82
GNEQ9Y223 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.18■□□□□ 0.82
GNEQ9Y223 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.18■□□□□ 0.82
GNEQ9Y223 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.18■□□□□ 0.82
GNEQ9Y223 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 AC005082.1-201ENST00000413042 2259 ntBASIC20.18■□□□□ 0.82
GNEQ9Y223 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GNEQ9Y223 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.17■□□□□ 0.82
GNEQ9Y223 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.17■□□□□ 0.82
GNEQ9Y223 AC104109.2-201ENST00000602919 1418 ntBASIC20.17■□□□□ 0.82
GNEQ9Y223 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.17■□□□□ 0.82
GNEQ9Y223 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GNEQ9Y223 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
GNEQ9Y223 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.16■□□□□ 0.82
GNEQ9Y223 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.16■□□□□ 0.82
GNEQ9Y223 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 BX842568.4-201ENST00000421222 227 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 OR7E14P-202ENST00000530490 1290 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.16■□□□□ 0.82
GNEQ9Y223 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 AL139288.1-201ENST00000623748 933 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 AP000867.4-201ENST00000641616 219 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GNEQ9Y223 AC116562.4-201ENST00000641316 2276 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.16■□□□□ 0.82
GNEQ9Y223 HLA-J-201ENST00000462773 1622 ntBASIC20.16■□□□□ 0.82
GNEQ9Y223 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GNEQ9Y223 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.15■□□□□ 0.82
GNEQ9Y223 MIR1233-2-201ENST00000408138 82 ntBASIC20.15■□□□□ 0.82
GNEQ9Y223 MIR1233-1-201ENST00000408722 82 ntBASIC20.15■□□□□ 0.82
GNEQ9Y223 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.15■□□□□ 0.82
GNEQ9Y223 AC034105.1-201ENST00000563488 319 ntBASIC20.15■□□□□ 0.82
GNEQ9Y223 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.15■□□□□ 0.82
GNEQ9Y223 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
GNEQ9Y223 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
GNEQ9Y223 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
GNEQ9Y223 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GNEQ9Y223 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.15■□□□□ 0.82
GNEQ9Y223 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
GNEQ9Y223 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GNEQ9Y223 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GNEQ9Y223 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GNEQ9Y223 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms