Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BSNQ9UPA5 AC138761.1-201ENST00000584393 385 ntBASIC16.33■□□□□ 0.2
BSNQ9UPA5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BSNQ9UPA5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 LINC00602-201ENST00000629776 2065 ntBASIC16.33■□□□□ 0.2
BSNQ9UPA5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BSNQ9UPA5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.33■□□□□ 0.2
BSNQ9UPA5 AL390955.2-201ENST00000603032 514 ntBASIC16.33■□□□□ 0.2
BSNQ9UPA5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.32■□□□□ 0.2
BSNQ9UPA5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 AC092364.2-202ENST00000597012 1073 ntBASIC16.32■□□□□ 0.2
BSNQ9UPA5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 HCG4B-203ENST00000450128 991 ntBASIC16.32■□□□□ 0.2
BSNQ9UPA5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 AP002472.1-201ENST00000577490 586 ntBASIC16.32■□□□□ 0.2
BSNQ9UPA5 AC011467.4-201ENST00000594891 528 ntBASIC16.32■□□□□ 0.2
BSNQ9UPA5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BSNQ9UPA5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BSNQ9UPA5 AC009102.3-201ENST00000623118 1491 ntBASIC16.31■□□□□ 0.2
BSNQ9UPA5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 AC007967.3-201ENST00000434308 558 ntBASIC16.31■□□□□ 0.2
BSNQ9UPA5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 AC009154.2-201ENST00000621177 724 ntBASIC16.31■□□□□ 0.2
BSNQ9UPA5 LINC01126-201ENST00000623515 1646 ntBASIC16.31■□□□□ 0.2
BSNQ9UPA5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BSNQ9UPA5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.31■□□□□ 0.2
BSNQ9UPA5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 AC244107.1-201ENST00000442033 332 ntBASIC16.3■□□□□ 0.2
BSNQ9UPA5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 MIR149-201ENST00000384879 89 ntBASIC16.3■□□□□ 0.2
BSNQ9UPA5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 AD001527.2-201ENST00000622994 785 ntBASIC16.3■□□□□ 0.2
BSNQ9UPA5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.3■□□□□ 0.2
BSNQ9UPA5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSNQ9UPA5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms