Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA1Q9UND3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA1Q9UND3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.77■□□□□ 0.27
NPIPA1Q9UND3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 AP003733.1-201ENST00000491725 852 ntBASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 Z83836.1-201ENST00000624605 1642 ntBASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms