Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 AC132938.6-201ENST00000623828 1655 ntBASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHA7Q9UN72 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 AP006294.2-201ENST00000641667 209 ntBASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 PP12613-201ENST00000424958 2230 ntBASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA7Q9UN72 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 MIR4497-201ENST00000583208 89 ntBASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 AC024243.1-201ENST00000609234 778 ntBASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHA7Q9UN72 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA7Q9UN72 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHA7Q9UN72 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA7Q9UN72 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA7Q9UN72 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 AC009947.2-201ENST00000444014 672 ntBASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 AL645608.8-201ENST00000606034 2086 ntBASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHA7Q9UN72 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA7Q9UN72 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms