Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 AC026471.5-201ENST00000615068 467 ntBASIC20.85■□□□□ 0.93
USP25Q9UHP3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP25Q9UHP3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP25Q9UHP3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 CRYGFP-201ENST00000418459 633 ntBASIC20.84■□□□□ 0.93
USP25Q9UHP3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.84■□□□□ 0.93
USP25Q9UHP3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP25Q9UHP3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP25Q9UHP3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
USP25Q9UHP3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP25Q9UHP3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP25Q9UHP3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP25Q9UHP3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP25Q9UHP3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.83■□□□□ 0.93
USP25Q9UHP3 MIR3180-5-201ENST00000583743 153 ntBASIC20.83■□□□□ 0.93
USP25Q9UHP3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.83■□□□□ 0.93
USP25Q9UHP3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP25Q9UHP3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP25Q9UHP3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
USP25Q9UHP3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
USP25Q9UHP3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP25Q9UHP3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
USP25Q9UHP3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP25Q9UHP3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.83■□□□□ 0.92
USP25Q9UHP3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms