Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.68■□□□□ 0.26
LRFN1Q9P244 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 TSPY12P-201ENST00000421279 868 ntBASIC16.67■□□□□ 0.26
LRFN1Q9P244 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 UNC93B7-201ENST00000509439 705 ntBASIC16.67■□□□□ 0.26
LRFN1Q9P244 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRFN1Q9P244 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRFN1Q9P244 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 AC005082.1-201ENST00000413042 2259 ntBASIC16.66■□□□□ 0.26
LRFN1Q9P244 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 IGHV3-47-201ENST00000425060 335 ntBASIC16.66■□□□□ 0.26
LRFN1Q9P244 MINOS1P3-201ENST00000457048 203 ntBASIC16.66■□□□□ 0.26
LRFN1Q9P244 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 KRT18P31-201ENST00000506277 1292 ntBASIC16.66■□□□□ 0.26
LRFN1Q9P244 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRFN1Q9P244 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRFN1Q9P244 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 FAAHP1-202ENST00000446499 1238 ntBASIC16.65■□□□□ 0.26
LRFN1Q9P244 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRFN1Q9P244 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NSUN5P1-202ENST00000421140 1535 ntBASIC16.65■□□□□ 0.26
LRFN1Q9P244 NSUN5P2-203ENST00000457352 1529 ntBASIC16.65■□□□□ 0.26
LRFN1Q9P244 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRFN1Q9P244 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LRFN1Q9P244 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRFN1Q9P244 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms