Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 SPDYE15P-201ENST00000424157 909 ntBASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 AL671277.2-201ENST00000458060 996 ntBASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 AL136038.4-201ENST00000603606 1261 ntBASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 LINC01311-201ENST00000565162 1445 ntBASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 AC087388.1-201ENST00000571370 1112 ntBASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 WIZP1-201ENST00000531444 2299 ntBASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.27■□□□□ 0.2
PARPBPQ9NWS1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 AL391807.1-203ENST00000604392 2365 ntBASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 AC126763.1-201ENST00000552015 2118 ntBASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PARPBPQ9NWS1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 KRT18P38-201ENST00000449496 1282 ntBASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 SDHAP2-201ENST00000455183 2001 ntBASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PARPBPQ9NWS1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 HBZP1-201ENST00000354915 429 ntBASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 HLA-F-220ENST00000434407 884 ntBASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.25■□□□□ 0.19
PARPBPQ9NWS1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms