Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF216Q9NWF9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AL513475.2-201ENST00000402316 392 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AL365338.1-201ENST00000422282 858 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AP002981.1-201ENST00000517692 975 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AL353719.1-201ENST00000566847 864 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 WWOX-216ENST00000569818 525 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AP001094.1-201ENST00000579805 193 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AC091076.1-201ENST00000610741 619 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 AC092338.2-201ENST00000568827 1415 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF216Q9NWF9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.03■□□□□ 0.96
RNF216Q9NWF9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 FAM8A6P-201ENST00000407496 1135 ntBASIC21.02■□□□□ 0.96
RNF216Q9NWF9 COX11P1-201ENST00000489116 835 ntBASIC21.02■□□□□ 0.96
RNF216Q9NWF9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 HEXB-205ENST00000509579 806 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 MTND4LP18-201ENST00000526864 291 ntBASIC21.02■□□□□ 0.96
RNF216Q9NWF9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 AC087683.2-201ENST00000611384 326 ntBASIC21.02■□□□□ 0.96
RNF216Q9NWF9 AL138966.2-201ENST00000621997 464 ntBASIC21.02■□□□□ 0.96
RNF216Q9NWF9 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
RNF216Q9NWF9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF216Q9NWF9 CIR1P2-201ENST00000514821 1342 ntBASIC21.02■□□□□ 0.95
RNF216Q9NWF9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 MTCO2P17-201ENST00000424336 677 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 RAB28P2-201ENST00000454299 641 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AL122001.1-201ENST00000457027 370 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms