Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 BX323043.1-201ENST00000641006 1765 ntBASIC19.58■□□□□ 0.73
NXF3Q9H4D5 PHGDH-209ENST00000641074 1780 ntBASIC19.58■□□□□ 0.73
NXF3Q9H4D5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
NXF3Q9H4D5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 AC009078.2-202ENST00000463353 338 ntBASIC19.58■□□□□ 0.72
NXF3Q9H4D5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 AC104692.2-201ENST00000603054 253 ntBASIC19.58■□□□□ 0.72
NXF3Q9H4D5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NXF3Q9H4D5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 POM121L3P-201ENST00000419331 1163 ntBASIC19.57■□□□□ 0.72
NXF3Q9H4D5 FDX1P1-201ENST00000449115 551 ntBASIC19.57■□□□□ 0.72
NXF3Q9H4D5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 KRT8P10-201ENST00000450021 1447 ntBASIC19.57■□□□□ 0.72
NXF3Q9H4D5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NXF3Q9H4D5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 AL138831.2-201ENST00000606564 490 ntBASIC19.56■□□□□ 0.72
NXF3Q9H4D5 REXO1L6P-202ENST00000619970 1078 ntBASIC19.56■□□□□ 0.72
NXF3Q9H4D5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NXF3Q9H4D5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 TP73-AS1-210ENST00000637775 1455 ntBASIC19.55■□□□□ 0.72
NXF3Q9H4D5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms