Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AL096828.2-201ENST00000567259 1965 ntBASIC16.75■□□□□ 0.27
TRIM2Q9C040 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 PHGDH-209ENST00000641074 1780 ntBASIC16.75■□□□□ 0.27
TRIM2Q9C040 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AC008764.6-201ENST00000595909 2069 ntBASIC16.75■□□□□ 0.27
TRIM2Q9C040 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AC092865.7-201ENST00000641832 219 ntBASIC16.75■□□□□ 0.27
TRIM2Q9C040 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM2Q9C040 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM2Q9C040 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 AC113347.1-201ENST00000413321 391 ntBASIC16.74■□□□□ 0.27
TRIM2Q9C040 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM2Q9C040 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM2Q9C040 AL133373.2-201ENST00000623187 2828 ntBASIC16.74■□□□□ 0.27
TRIM2Q9C040 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 AC005521.1-201ENST00000393351 872 ntBASIC16.73■□□□□ 0.27
TRIM2Q9C040 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms