Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.78□□□□□ -0.04
ZNF48Q96MX3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 LINC01711-201ENST00000598340 967 ntBASIC14.78□□□□□ -0.04
ZNF48Q96MX3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF48Q96MX3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF48Q96MX3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 AC009065.1-201ENST00000564055 1225 ntBASIC14.77□□□□□ -0.05
ZNF48Q96MX3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF48Q96MX3 NSUN5P1-202ENST00000421140 1535 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 NSUN5P2-203ENST00000457352 1529 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms