Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 AC128688.1-201ENST00000487626 519 ntBASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 AC116562.4-202ENST00000641738 218 ntBASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCHCR1Q8TD31 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 TSPY17P-201ENST00000450329 467 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 EGLN1P1-201ENST00000531623 762 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 LINC00896-202ENST00000609602 2128 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 AC106820.2-201ENST00000563775 3264 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 KRT8P9-201ENST00000558927 1449 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 CYP2D8P-201ENST00000433633 1490 ntBASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCHCR1Q8TD31 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 TSPY14P-201ENST00000303979 915 ntBASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 AL023284.2-201ENST00000405850 579 ntBASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCHCR1Q8TD31 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCHCR1Q8TD31 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms