Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 AC233702.3-201ENST00000578656 1387 ntBASIC21.1■□□□□ 0.97
PNMA1Q8ND90 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 AC068472.1-201ENST00000474589 881 ntBASIC21.1■□□□□ 0.97
PNMA1Q8ND90 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PNMA1Q8ND90 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 AP000867.3-201ENST00000524675 377 ntBASIC21.09■□□□□ 0.97
PNMA1Q8ND90 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 AL353801.3-201ENST00000609898 542 ntBASIC21.09■□□□□ 0.97
PNMA1Q8ND90 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.09■□□□□ 0.97
PNMA1Q8ND90 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.09■□□□□ 0.97
PNMA1Q8ND90 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PNMA1Q8ND90 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.08■□□□□ 0.97
PNMA1Q8ND90 AC091607.1-201ENST00000490318 1060 ntBASIC21.08■□□□□ 0.97
PNMA1Q8ND90 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 AP005901.3-202ENST00000581653 237 ntBASIC21.08■□□□□ 0.97
PNMA1Q8ND90 CLEC4GP1-201ENST00000596555 870 ntBASIC21.08■□□□□ 0.97
PNMA1Q8ND90 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PNMA1Q8ND90 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PNMA1Q8ND90 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PNMA1Q8ND90 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms