Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 TPM4P1-201ENST00000436100 807 ntBASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 AC012615.1-201ENST00000565797 1299 ntBASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNEP1R1Q8N9A8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 AC011840.4-201ENST00000578471 627 ntBASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 AC233702.3-201ENST00000578656 1387 ntBASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNEP1R1Q8N9A8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AL024508.2-201ENST00000607749 1894 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 TSPY12P-201ENST00000421279 868 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 FOSL1P1-201ENST00000511041 816 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AC111152.3-201ENST00000569699 673 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AC138894.3-201ENST00000603787 634 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AP000974.1-201ENST00000623909 2387 ntBASIC16.12■□□□□ 0.17
CNEP1R1Q8N9A8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNEP1R1Q8N9A8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNEP1R1Q8N9A8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CNEP1R1Q8N9A8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CNEP1R1Q8N9A8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms