Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF28Q8N1W1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 AC073592.4-201ENST00000623827 446 ntBASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 AC117500.6-201ENST00000624871 588 ntBASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 SIGLEC16-201ENST00000599858 1437 ntBASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 AC148477.5-201ENST00000625164 1645 ntBASIC25.04■■□□□ 1.6
ARHGEF28Q8N1W1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 AC006538.3-201ENST00000612495 578 ntBASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 AD001527.2-201ENST00000622994 785 ntBASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 PMPCAP1-201ENST00000508114 1576 ntBASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARHGEF28Q8N1W1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 KRT18P27-201ENST00000427733 1299 ntBASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 AC122714.2-201ENST00000502787 707 ntBASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 CD63-204ENST00000546939 779 ntTSL 3 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 AC140113.2-201ENST00000604370 208 ntBASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 AC116407.3-201ENST00000623905 1129 ntBASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms