Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 KRT89P-201ENST00000620027 1478 ntBASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 AC005332.1-201ENST00000577698 1310 ntBASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 AL645929.1-201ENST00000420084 975 ntBASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 AL390961.4-201ENST00000623958 2535 ntBASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCUBE3Q8IX30 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 LINC00602-201ENST00000629776 2065 ntBASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AC008687.5-201ENST00000593746 558 ntBASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AC091076.1-201ENST00000610741 619 ntBASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
SCUBE3Q8IX30 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 PCED1CP-201ENST00000419887 785 ntBASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 UPK3BP1-201ENST00000428678 509 ntBASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 AC005332.3-201ENST00000589904 676 ntBASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.09■□□□□ 0.65
SCUBE3Q8IX30 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms