Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AP003071.4-201ENST00000562276 1284 ntBASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 MIR4674-201ENST00000582457 87 ntBASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AC138028.4-201ENST00000564984 1845 ntBASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 Z99916.2-201ENST00000604037 246 ntBASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SIRPAP1-201ENST00000448467 1770 ntBASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC50Q8IVM0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC50Q8IVM0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 AC124067.4-201ENST00000519691 2379 ntBASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 AP005242.2-201ENST00000580065 1175 ntBASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms