Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AC004951.3-201ENST00000418645 1148 ntBASIC16.81■□□□□ 0.28
TUBA1AQ71U36 RBM17P1-201ENST00000453646 1190 ntBASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AC091390.4-202ENST00000476426 537 ntBASIC16.81■□□□□ 0.28
TUBA1AQ71U36 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AC026271.3-201ENST00000571884 352 ntBASIC16.81■□□□□ 0.28
TUBA1AQ71U36 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AP000525.1-201ENST00000608286 694 ntBASIC16.81■□□□□ 0.28
TUBA1AQ71U36 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AC080080.1-201ENST00000625121 2420 ntBASIC16.8■□□□□ 0.28
TUBA1AQ71U36 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AL390955.1-201ENST00000428694 934 ntBASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AC116562.2-201ENST00000507042 360 ntBASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 KRT8P41-201ENST00000533985 1514 ntBASIC16.8■□□□□ 0.28
TUBA1AQ71U36 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBA1AQ71U36 FSCN1P1-201ENST00000568912 1481 ntBASIC16.8■□□□□ 0.28
TUBA1AQ71U36 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 AC135776.1-201ENST00000319817 2481 ntBASIC16.79■□□□□ 0.28
TUBA1AQ71U36 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBA1AQ71U36 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 AC108860.2-201ENST00000562760 2183 ntBASIC16.78■□□□□ 0.28
TUBA1AQ71U36 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms