Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 AC079328.2-201ENST00000561241 3354 ntBASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CYP2T1P-201ENST00000432607 1285 ntBASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 KRT8P8-201ENST00000434750 1448 ntBASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00173Q6ZV60 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00173Q6ZV60 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms