Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 AC091076.1-201ENST00000610741 619 ntBASIC17.07■□□□□ 0.32
RTL4Q6ZR62 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL4Q6ZR62 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 LINC01311-201ENST00000565162 1445 ntBASIC17.06■□□□□ 0.32
RTL4Q6ZR62 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 AC104390.1-201ENST00000555663 520 ntBASIC17.06■□□□□ 0.32
RTL4Q6ZR62 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.06■□□□□ 0.32
RTL4Q6ZR62 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTL4Q6ZR62 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 MIR3917-201ENST00000580971 93 ntBASIC17.05■□□□□ 0.32
RTL4Q6ZR62 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AL358472.4-201ENST00000633140 710 ntBASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL4Q6ZR62 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms