Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 LINC01023-201ENST00000606054 436 ntBASIC16.57■□□□□ 0.24
NIPAL3Q6P499 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.57■□□□□ 0.24
NIPAL3Q6P499 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 MIR564-202ENST00000385049 94 ntBASIC16.56■□□□□ 0.24
NIPAL3Q6P499 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 LIN28AP1-201ENST00000429574 405 ntBASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 SLC25A3P1-201ENST00000443844 931 ntBASIC16.56■□□□□ 0.24
NIPAL3Q6P499 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 AL512604.3-201ENST00000569583 964 ntBASIC16.56■□□□□ 0.24
NIPAL3Q6P499 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NIPAL3Q6P499 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 AC005363.2-201ENST00000618631 242 ntBASIC16.55■□□□□ 0.24
NIPAL3Q6P499 AC097493.4-201ENST00000641197 219 ntBASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NIPAL3Q6P499 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms