Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRNP1Q6NT89 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 AP003733.1-201ENST00000491725 852 ntBASIC18.91■□□□□ 0.62
TRNP1Q6NT89 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.91■□□□□ 0.62
TRNP1Q6NT89 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRNP1Q6NT89 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 DUTP2-201ENST00000519164 463 ntBASIC18.9■□□□□ 0.62
TRNP1Q6NT89 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 LINC01238-205ENST00000567549 1107 ntBASIC18.9■□□□□ 0.62
TRNP1Q6NT89 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 AL390719.2-201ENST00000606993 987 ntBASIC18.9■□□□□ 0.62
TRNP1Q6NT89 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.9■□□□□ 0.62
TRNP1Q6NT89 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
TRNP1Q6NT89 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.89■□□□□ 0.62
TRNP1Q6NT89 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TRNP1Q6NT89 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRNP1Q6NT89 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 AL645929.1-201ENST00000420084 975 ntBASIC18.89■□□□□ 0.61
TRNP1Q6NT89 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.89■□□□□ 0.61
TRNP1Q6NT89 FAM86EP-206ENST00000510506 987 ntBASIC18.89■□□□□ 0.61
TRNP1Q6NT89 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms