Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 AC079602.3-201ENST00000623931 403 ntBASIC19.09■□□□□ 0.65
RNF43Q68DV7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF43Q68DV7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF43Q68DV7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 LINC01311-201ENST00000565162 1445 ntBASIC19.08■□□□□ 0.65
RNF43Q68DV7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF43Q68DV7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF43Q68DV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RNF43Q68DV7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF43Q68DV7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF43Q68DV7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RNF43Q68DV7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF43Q68DV7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 AC092597.1-201ENST00000487352 616 ntBASIC19.08■□□□□ 0.64
RNF43Q68DV7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 AC010240.3-201ENST00000607688 395 ntBASIC19.08■□□□□ 0.64
RNF43Q68DV7 AL157888.1-201ENST00000631930 593 ntBASIC19.08■□□□□ 0.64
RNF43Q68DV7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF43Q68DV7 ABALON-201ENST00000629058 1903 ntBASIC19.08■□□□□ 0.64
RNF43Q68DV7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.07■□□□□ 0.64
RNF43Q68DV7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF43Q68DV7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF43Q68DV7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 AL357033.4-201ENST00000617703 1807 ntBASIC19.06■□□□□ 0.64
RNF43Q68DV7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF43Q68DV7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF43Q68DV7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF43Q68DV7 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.05■□□□□ 0.64
RNF43Q68DV7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
RNF43Q68DV7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF43Q68DV7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF43Q68DV7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms