Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 AP000550.4-202ENST00000639755 178 ntBASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 AC068880.1-201ENST00000507289 2297 ntBASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 AC009102.3-201ENST00000623118 1491 ntBASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 AC005332.1-201ENST00000577698 1310 ntBASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39BQ5VTQ0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 AL162741.1-201ENST00000565563 1558 ntBASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 AL358472.4-201ENST00000633140 710 ntBASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39BQ5VTQ0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 PCED1CP-201ENST00000419887 785 ntBASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 AL645929.1-201ENST00000420084 975 ntBASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 SPDYE13P-201ENST00000445314 798 ntBASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 AC008687.5-201ENST00000593746 558 ntBASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms