Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 AL357033.4-201ENST00000617703 1807 ntBASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 AC233723.2-201ENST00000623798 2106 ntBASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 AP005212.1-201ENST00000581547 1997 ntBASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AL592309.1-201ENST00000443127 649 ntBASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 SPTLC1P1-201ENST00000447199 261 ntBASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AC132938.2-201ENST00000579188 680 ntBASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AL591163.1-201ENST00000641757 987 ntBASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL13A1Q5TAT6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 AC069120.2-201ENST00000524091 540 ntBASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 OR7E47P-204ENST00000575924 449 ntBASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 KRT8P47-201ENST00000604727 1398 ntBASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL13A1Q5TAT6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 GUSBP5-202ENST00000510805 1989 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC098614.1-201ENST00000368528 745 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC092580.3-201ENST00000430932 139 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 RBPMS2P1-201ENST00000437762 623 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 RHOQP1-201ENST00000555758 579 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC106886.1-201ENST00000568660 600 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 AC009154.2-201ENST00000621177 724 ntBASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COL13A1Q5TAT6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL13A1Q5TAT6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL13A1Q5TAT6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL13A1Q5TAT6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 SIGLEC16-201ENST00000599858 1437 ntBASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms