Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSL3PQ5NE16 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 HOMER2P1-201ENST00000455653 964 ntBASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 AC024563.2-201ENST00000603282 481 ntBASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSL3PQ5NE16 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 AC005332.8-201ENST00000622750 2735 ntBASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 SLC25A6P5-201ENST00000435663 894 ntBASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 AC008687.5-201ENST00000593746 558 ntBASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 HYMAI.1-201ENST00000620949 238 ntBASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 LINC00602-201ENST00000629776 2065 ntBASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSL3PQ5NE16 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTSL3PQ5NE16 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTSL3PQ5NE16 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
CTSL3PQ5NE16 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CTSL3PQ5NE16 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
CTSL3PQ5NE16 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSL3PQ5NE16 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms