Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 NEK4P2-201ENST00000580004 1012 ntBASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP13A4Q4VNC1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 GCSHP2-201ENST00000560971 527 ntBASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 AL512604.3-201ENST00000569583 964 ntBASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP13A4Q4VNC1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 AC009065.1-201ENST00000564055 1225 ntBASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 AL023973.1-201ENST00000624619 620 ntBASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 AC133561.5-201ENST00000635547 218 ntBASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 AC132938.6-201ENST00000623828 1655 ntBASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 LINC00896-202ENST00000609602 2128 ntBASIC18.94■□□□□ 0.62
ATP13A4Q4VNC1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms