Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AC091607.1-201ENST00000490318 1060 ntBASIC21.94■■□□□ 1.1
RFX7Q2KHR2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AL031008.1-201ENST00000619963 541 ntBASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX7Q2KHR2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 IGHV3-47-201ENST00000425060 335 ntBASIC21.93■■□□□ 1.1
RFX7Q2KHR2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 AC104692.2-201ENST00000603054 253 ntBASIC21.93■■□□□ 1.1
RFX7Q2KHR2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX7Q2KHR2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 EMBP1-201ENST00000458200 901 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 KRT18P31-201ENST00000506277 1292 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 FOSL1P1-201ENST00000511041 816 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 DUTP2-201ENST00000519164 463 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 AL353801.3-201ENST00000609898 542 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 KRT8P10-201ENST00000450021 1447 ntBASIC21.92■■□□□ 1.1
RFX7Q2KHR2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX7Q2KHR2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 AC079781.3-201ENST00000449110 356 ntBASIC21.91■■□□□ 1.1
RFX7Q2KHR2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 AC074051.2-201ENST00000565115 352 ntBASIC21.91■■□□□ 1.1
RFX7Q2KHR2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 NOC2LP1-202ENST00000452600 2235 ntBASIC21.91■■□□□ 1.1
RFX7Q2KHR2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX7Q2KHR2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms