Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 AC137761.2-201ENST00000561729 223 ntBASIC15.64■□□□□ 0.09
AP3S2P59780 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3S2P59780 AC145350.3-201ENST00000569033 163 ntBASIC15.64■□□□□ 0.09
AP3S2P59780 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 AC231657.2-201ENST00000624556 255 ntBASIC15.64■□□□□ 0.09
AP3S2P59780 AC018695.7-201ENST00000624587 2492 ntBASIC15.64■□□□□ 0.09
AP3S2P59780 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
AP3S2P59780 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.64■□□□□ 0.09
AP3S2P59780 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3S2P59780 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S2P59780 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 AL138688.1-201ENST00000624851 1594 ntBASIC15.63■□□□□ 0.09
AP3S2P59780 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S2P59780 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 KRT18P41-201ENST00000518924 1277 ntBASIC15.63■□□□□ 0.09
AP3S2P59780 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S2P59780 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.63■□□□□ 0.09
AP3S2P59780 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 NTF6G-201ENST00000591094 616 ntBASIC15.63■□□□□ 0.09
AP3S2P59780 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.63■□□□□ 0.09
AP3S2P59780 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S2P59780 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
AP3S2P59780 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
AP3S2P59780 HTR7P1-201ENST00000538670 1336 ntBASIC15.63■□□□□ 0.09
AP3S2P59780 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3S2P59780 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
AP3S2P59780 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S2P59780 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.62■□□□□ 0.09
AP3S2P59780 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
AP3S2P59780 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP3S2P59780 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
AP3S2P59780 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.62■□□□□ 0.09
AP3S2P59780 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.62■□□□□ 0.09
AP3S2P59780 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.62■□□□□ 0.09
AP3S2P59780 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.62■□□□□ 0.09
AP3S2P59780 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.62■□□□□ 0.09
AP3S2P59780 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
AP3S2P59780 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
AP3S2P59780 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.62■□□□□ 0.09
AP3S2P59780 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 PHGDH-209ENST00000641074 1780 ntBASIC15.62■□□□□ 0.09
AP3S2P59780 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP3S2P59780 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S2P59780 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.61■□□□□ 0.09
AP3S2P59780 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
AP3S2P59780 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms