Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN1P58418 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLRN1P58418 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.28■□□□□ 0.2
CLRN1P58418 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.28■□□□□ 0.2
CLRN1P58418 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLRN1P58418 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLRN1P58418 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN1P58418 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLRN1P58418 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLRN1P58418 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN1P58418 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.27■□□□□ 0.2
CLRN1P58418 REXO1L9P-201ENST00000604264 2108 ntBASIC16.27■□□□□ 0.2
CLRN1P58418 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.27■□□□□ 0.2
CLRN1P58418 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CLRN1P58418 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.27■□□□□ 0.2
CLRN1P58418 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN1P58418 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLRN1P58418 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN1P58418 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN1P58418 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CLRN1P58418 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLRN1P58418 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN1P58418 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.27■□□□□ 0.19
CLRN1P58418 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLRN1P58418 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLRN1P58418 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN1P58418 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN1P58418 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.26■□□□□ 0.19
CLRN1P58418 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.26■□□□□ 0.19
CLRN1P58418 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.26■□□□□ 0.19
CLRN1P58418 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 AC140113.3-201ENST00000605663 199 ntBASIC16.26■□□□□ 0.19
CLRN1P58418 AC005363.2-201ENST00000618631 242 ntBASIC16.26■□□□□ 0.19
CLRN1P58418 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLRN1P58418 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
CLRN1P58418 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CLRN1P58418 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN1P58418 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN1P58418 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.25■□□□□ 0.19
CLRN1P58418 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLRN1P58418 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.25■□□□□ 0.19
CLRN1P58418 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.25■□□□□ 0.19
CLRN1P58418 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CLRN1P58418 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLRN1P58418 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms