Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
EPHA4P54764 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHA4P54764 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHA4P54764 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
EPHA4P54764 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
EPHA4P54764 AC004408.2-201ENST00000623613 2777 ntBASIC17.48■□□□□ 0.39
EPHA4P54764 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHA4P54764 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.48■□□□□ 0.39
EPHA4P54764 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHA4P54764 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHA4P54764 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EPHA4P54764 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHA4P54764 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHA4P54764 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHA4P54764 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA4P54764 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
EPHA4P54764 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA4P54764 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
EPHA4P54764 NUS1P2-201ENST00000417358 873 ntBASIC17.47■□□□□ 0.39
EPHA4P54764 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.47■□□□□ 0.39
EPHA4P54764 EMBP1-201ENST00000458200 901 ntBASIC17.47■□□□□ 0.39
EPHA4P54764 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.47■□□□□ 0.39
EPHA4P54764 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.47■□□□□ 0.39
EPHA4P54764 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EPHA4P54764 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.47■□□□□ 0.39
EPHA4P54764 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.47■□□□□ 0.39
EPHA4P54764 GMCL1P1-201ENST00000463439 1581 ntBASIC17.47■□□□□ 0.39
EPHA4P54764 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA4P54764 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EPHA4P54764 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
EPHA4P54764 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
EPHA4P54764 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA4P54764 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 LINC00602-201ENST00000629776 2065 ntBASIC17.46■□□□□ 0.39
EPHA4P54764 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA4P54764 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.46■□□□□ 0.39
EPHA4P54764 MTCL1P1-201ENST00000446207 792 ntBASIC17.46■□□□□ 0.39
EPHA4P54764 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA4P54764 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.46■□□□□ 0.39
EPHA4P54764 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.46■□□□□ 0.39
EPHA4P54764 BNIP3P18-201ENST00000593976 575 ntBASIC17.46■□□□□ 0.39
EPHA4P54764 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.46■□□□□ 0.39
EPHA4P54764 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
EPHA4P54764 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA4P54764 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA4P54764 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.46■□□□□ 0.38
EPHA4P54764 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
EPHA4P54764 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA4P54764 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms