Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.65■□□□□ 0.42
PDX1P52945 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
PDX1P52945 AC004263.2-201ENST00000617183 678 ntBASIC17.65■□□□□ 0.42
PDX1P52945 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.65■□□□□ 0.42
PDX1P52945 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDX1P52945 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
PDX1P52945 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PDX1P52945 AL353692.3-201ENST00000407031 1396 ntBASIC17.65■□□□□ 0.42
PDX1P52945 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.64■□□□□ 0.42
PDX1P52945 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDX1P52945 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PDX1P52945 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDX1P52945 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
PDX1P52945 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
PDX1P52945 KRT89P-201ENST00000620027 1478 ntBASIC17.64■□□□□ 0.41
PDX1P52945 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 AL138781.2-201ENST00000617896 1843 ntBASIC17.64■□□□□ 0.41
PDX1P52945 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.64■□□□□ 0.41
PDX1P52945 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PDX1P52945 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.64■□□□□ 0.41
PDX1P52945 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PDX1P52945 GUSBP12-201ENST00000513727 720 ntBASIC17.64■□□□□ 0.41
PDX1P52945 AL662844.1-201ENST00000546340 181 ntBASIC17.64■□□□□ 0.41
PDX1P52945 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.64■□□□□ 0.41
PDX1P52945 REXO1L6P-202ENST00000619970 1078 ntBASIC17.64■□□□□ 0.41
PDX1P52945 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.64■□□□□ 0.41
PDX1P52945 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.64■□□□□ 0.41
PDX1P52945 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 HLA-A-201ENST00000376802 1334 ntBASIC17.64■□□□□ 0.41
PDX1P52945 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDX1P52945 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.64■□□□□ 0.41
PDX1P52945 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDX1P52945 KRT8P50-201ENST00000562022 1438 ntBASIC17.64■□□□□ 0.41
PDX1P52945 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
PDX1P52945 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDX1P52945 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDX1P52945 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
PDX1P52945 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.63■□□□□ 0.41
PDX1P52945 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PDX1P52945 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.63■□□□□ 0.41
PDX1P52945 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
PDX1P52945 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.63■□□□□ 0.41
PDX1P52945 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.63■□□□□ 0.41
PDX1P52945 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PDX1P52945 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDX1P52945 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.63■□□□□ 0.41
PDX1P52945 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDX1P52945 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDX1P52945 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PDX1P52945 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.62■□□□□ 0.41
PDX1P52945 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDX1P52945 NUS1P2-201ENST00000417358 873 ntBASIC17.62■□□□□ 0.41
PDX1P52945 SAPCD2P3-201ENST00000455031 850 ntBASIC17.62■□□□□ 0.41
PDX1P52945 AC079776.4-201ENST00000511039 504 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms