Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPT1AP50416 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 HLA-J-201ENST00000462773 1622 ntBASIC20.09■□□□□ 0.81
CPT1AP50416 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
CPT1AP50416 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.09■□□□□ 0.81
CPT1AP50416 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.09■□□□□ 0.81
CPT1AP50416 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.09■□□□□ 0.81
CPT1AP50416 MIR940-201ENST00000401276 94 ntBASIC20.09■□□□□ 0.81
CPT1AP50416 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.09■□□□□ 0.81
CPT1AP50416 RPS2P1-201ENST00000434010 821 ntBASIC20.09■□□□□ 0.81
CPT1AP50416 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.09■□□□□ 0.81
CPT1AP50416 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.09■□□□□ 0.81
CPT1AP50416 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.09■□□□□ 0.81
CPT1AP50416 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CPT1AP50416 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
CPT1AP50416 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPT1AP50416 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPT1AP50416 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPT1AP50416 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPT1AP50416 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPT1AP50416 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPT1AP50416 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.08■□□□□ 0.81
CPT1AP50416 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.08■□□□□ 0.81
CPT1AP50416 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CPT1AP50416 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 OR7E14P-202ENST00000530490 1290 ntBASIC20.08■□□□□ 0.81
CPT1AP50416 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.08■□□□□ 0.81
CPT1AP50416 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.08■□□□□ 0.81
CPT1AP50416 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPT1AP50416 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.08■□□□□ 0.8
CPT1AP50416 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.08■□□□□ 0.8
CPT1AP50416 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPT1AP50416 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPT1AP50416 GMCL1P1-201ENST00000463439 1581 ntBASIC20.08■□□□□ 0.8
CPT1AP50416 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.08■□□□□ 0.8
CPT1AP50416 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.07■□□□□ 0.8
CPT1AP50416 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.07■□□□□ 0.8
CPT1AP50416 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.07■□□□□ 0.8
CPT1AP50416 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CPT1AP50416 IGHV3-22-201ENST00000520721 359 ntBASIC20.07■□□□□ 0.8
CPT1AP50416 AC145285.3-201ENST00000564603 959 ntBASIC20.07■□□□□ 0.8
CPT1AP50416 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.07■□□□□ 0.8
CPT1AP50416 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPT1AP50416 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
CPT1AP50416 AC116562.4-201ENST00000641316 2276 ntBASIC20.07■□□□□ 0.8
CPT1AP50416 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPT1AP50416 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 ANO7L1-203ENST00000602586 1720 ntBASIC20.07■□□□□ 0.8
CPT1AP50416 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPT1AP50416 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPT1AP50416 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPT1AP50416 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPT1AP50416 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.06■□□□□ 0.8
CPT1AP50416 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CPT1AP50416 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CPT1AP50416 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.06■□□□□ 0.8
CPT1AP50416 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPT1AP50416 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.06■□□□□ 0.8
CPT1AP50416 FAM220CP-201ENST00000395253 831 ntBASIC20.06■□□□□ 0.8
CPT1AP50416 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CPT1AP50416 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.06■□□□□ 0.8
CPT1AP50416 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPT1AP50416 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.06■□□□□ 0.8
CPT1AP50416 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.06■□□□□ 0.8
CPT1AP50416 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms