Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.42■□□□□ 0.86
CENPFP49454 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.42■□□□□ 0.86
CENPFP49454 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.42■□□□□ 0.86
CENPFP49454 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CENPFP49454 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 LINC00602-201ENST00000629776 2065 ntBASIC20.42■□□□□ 0.86
CENPFP49454 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CENPFP49454 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.42■□□□□ 0.86
CENPFP49454 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.42■□□□□ 0.86
CENPFP49454 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 NKAPP1-205ENST00000585790 367 ntBASIC20.42■□□□□ 0.86
CENPFP49454 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.42■□□□□ 0.86
CENPFP49454 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.42■□□□□ 0.86
CENPFP49454 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.42■□□□□ 0.86
CENPFP49454 AL032819.2-201ENST00000624543 2162 ntBASIC20.42■□□□□ 0.86
CENPFP49454 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.42■□□□□ 0.86
CENPFP49454 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CENPFP49454 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.41■□□□□ 0.86
CENPFP49454 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.41■□□□□ 0.86
CENPFP49454 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.41■□□□□ 0.86
CENPFP49454 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.41■□□□□ 0.86
CENPFP49454 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.41■□□□□ 0.86
CENPFP49454 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 PMPCAP1-201ENST00000508114 1576 ntBASIC20.41■□□□□ 0.86
CENPFP49454 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.41■□□□□ 0.86
CENPFP49454 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.41■□□□□ 0.86
CENPFP49454 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CENPFP49454 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 MKNK2P1-201ENST00000437526 628 ntBASIC20.4■□□□□ 0.86
CENPFP49454 PRSS29P-201ENST00000440800 595 ntBASIC20.4■□□□□ 0.86
CENPFP49454 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.4■□□□□ 0.86
CENPFP49454 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.4■□□□□ 0.86
CENPFP49454 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.4■□□□□ 0.86
CENPFP49454 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 AC148477.5-201ENST00000625164 1645 ntBASIC20.4■□□□□ 0.86
CENPFP49454 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CENPFP49454 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPFP49454 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.4■□□□□ 0.86
CENPFP49454 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.4■□□□□ 0.86
CENPFP49454 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPFP49454 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
CENPFP49454 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.39■□□□□ 0.86
CENPFP49454 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CENPFP49454 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CENPFP49454 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
CENPFP49454 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CENPFP49454 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.39■□□□□ 0.85
CENPFP49454 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CENPFP49454 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.39■□□□□ 0.85
CENPFP49454 AL024508.2-201ENST00000607749 1894 ntBASIC20.39■□□□□ 0.85
CENPFP49454 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPFP49454 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CENPFP49454 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms