Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CEACAM3P40198 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.85□□□□□ -0.03
CEACAM3P40198 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.85□□□□□ -0.03
CEACAM3P40198 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.85□□□□□ -0.03
CEACAM3P40198 AL136038.4-201ENST00000603606 1261 ntBASIC14.85□□□□□ -0.03
CEACAM3P40198 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CEACAM3P40198 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 AL162741.1-201ENST00000565563 1558 ntBASIC14.85□□□□□ -0.03
CEACAM3P40198 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CEACAM3P40198 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 SDHAP2-201ENST00000455183 2001 ntBASIC14.84□□□□□ -0.03
CEACAM3P40198 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.84□□□□□ -0.03
CEACAM3P40198 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 AC112907.2-201ENST00000448639 330 ntBASIC14.84□□□□□ -0.03
CEACAM3P40198 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CEACAM3P40198 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.84□□□□□ -0.03
CEACAM3P40198 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.84□□□□□ -0.03
CEACAM3P40198 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.84□□□□□ -0.03
CEACAM3P40198 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CEACAM3P40198 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.84□□□□□ -0.03
CEACAM3P40198 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CEACAM3P40198 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CEACAM3P40198 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CEACAM3P40198 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CEACAM3P40198 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CEACAM3P40198 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CEACAM3P40198 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CEACAM3P40198 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CEACAM3P40198 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CEACAM3P40198 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CEACAM3P40198 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.83□□□□□ -0.04
CEACAM3P40198 SPDYE15P-201ENST00000424157 909 ntBASIC14.83□□□□□ -0.04
CEACAM3P40198 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.83□□□□□ -0.04
CEACAM3P40198 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.83□□□□□ -0.04
CEACAM3P40198 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.83□□□□□ -0.04
CEACAM3P40198 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.83□□□□□ -0.04
CEACAM3P40198 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.83□□□□□ -0.04
CEACAM3P40198 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.83□□□□□ -0.04
CEACAM3P40198 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.04
CEACAM3P40198 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CEACAM3P40198 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.83□□□□□ -0.04
CEACAM3P40198 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CEACAM3P40198 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.83□□□□□ -0.04
CEACAM3P40198 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CEACAM3P40198 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CEACAM3P40198 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.82□□□□□ -0.04
CEACAM3P40198 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CEACAM3P40198 AL391807.1-203ENST00000604392 2365 ntBASIC14.82□□□□□ -0.04
CEACAM3P40198 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CEACAM3P40198 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.82□□□□□ -0.04
CEACAM3P40198 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CEACAM3P40198 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms